Supported Publications

All work performed by the Tumor Engineering and Phenotyping Shared Resource (TEP)  should be acknowledged in scholarly publications, posters, and presentations. Proper recognition allows us to measure the impact of our work and supports our initiatives in obtaining sponsored funding. In addition, any TEP personnel who makes a substantial intellectual or experimental contribution is deserving of further recognition as a co-author. Recent publications are listed where TEP has authorship or TEP contribution is recognized.


  • Kolliopoulos V, Polanek M, Xu H, Harley B. Inflammatory Licensed hMSCs Exhibit Enhanced Immunomodulatory Capacity in a Biomaterial Mediated Manner. ACS Biomater Sci Eng. 2023 Aug 14;9(8):4916-4928. doi: 10.1021/acsbiomaterials.3c00290. Epub 2023 Jun 30. PMID: 37390452.
  • Adam T. Nelczyk, Liqian Ma, Anasuya Das Gupta, Hashni Epa Vidana Gamage, Michael T. McHenry, Madeline A. Henn, Mohammed Kadiri, Yu Wang, Natalia Krawczynska, Shruti Bendre, Sisi He, Sayyed Hamed Shahoei, Zeynep Madak-Erdogan, Shih-Hsuan Hsiao, Tareq Saleh, Valerie Carpenter, David A. Gewirtz, Michael J. Spinella, Erik R. Nelson, The nuclear receptor TLX (NR2E1) inhibits growth and progression of triple- negative breast cancer, Biochimica et Biophysica Acta (BBA) – Molecular Basis of Disease, Volume 1868, Issue 11, 2022, 166515, ISSN 0925-4439,
  • Kolliopoulos V, Dewey MJ, Polanek M, Xu H, Harley BAC. Amnion and chorion matrix maintain hMSC osteogenic response and enhance immunomodulatory and angiogenic potential in a mineralized collagen scaffold. Front Bioeng Biotechnol. 2022 Nov 14;10:1034701. doi: 10.3389/fbioe.2022.1034701. PMID: 36466348; PMCID: PMC9714677.
  • Hashni Epa Vidana GamageSayyed Hamed ShahoeiSamuel T. AlbrightYu WangAmanda J. SmithRachel FarmerEmma C. FinkElise JacquinErin WeisserRafael O. BautistaMadeline A. HennClaire P. SchaneAdam T. NelczykLiqian MaAnasuya Das GuptaShrutiV. BendreTiffany NguyenSrishti TiwariNatalia KrawczynskaSisi HeEvelyn TjoandaHong ChenMaria SverdlovPeter H. GannRomain BoidotFrederique VegranSean W. FanningLionel ApetohPaul J. HergenrotherErik R. Nelson


Seahorse Analyzer:

  • Modi N, Chen Y, Dong X, Hu X, Lau GW, Wilson KT, Peek Jr. RM, Chen LF, BRD4 regulates glycolysis-dependent Nos2 expression in macrophages upon H. pylori infection, Cellular and Molecular Gastroenterology and Hepatology (2023), doi: j.jcmgh.2023.10.001.
  • Tian, Ye1; Jellinek, Matthew J.2; Mehta, Kritika3; Seok, Sun Mi4; Kuo, Shanny H.5; Lu, Wei1; Shi, Ruicheng1; Lee, Richard6; Lau, Gee W.5; Kemper, Jongsook Kim4,7; Zhang, Kai3; Ford, David A.2; Wang, Bo1,7,8. Membrane phospholipid remodeling modulates nonalcoholic steatohepatitis progression by regulating mitochondrial homeostasis. Hepatology ():10.1097/HEP.0000000000000375, April 1, 2023. | DOI: 10.1097/HEP.0000000000000375
  • Victoria MesserschmidtWen RenMichael TsipurskyJoseph Irudayaraj; Characterization of Oxygen Nanobubbles and In Vitro Evaluation of Retinal Cells in Hypoxia. Trans. Vis. Sci. Tech. 2023;12(2):16.


miRNA extraction and RT-PCR quantification:

  • Wang X, Shepherd S, Li N, Che C, Song T, Xiong Y, Palm IR, Zhao B, Kohli M, Demirci U, Lu Y, Cunningham BT. A Target Recycling Amplification Process for the Digital Detection of Exosomal MicroRNAs through Photonic Resonator Absorption Microscopy. Angew Chem Int Ed Engl. 2023 Apr 11;62(16):e202217932. doi: 10.1002/anie.202217932. Epub 2023 Mar 6. PMID: 36622783; PMCID: PMC10073263.


Customized service:

  • Hsieh PH, Phal Y, Prasanth KV, Bhargava R. Cell Phase Identification in a Three-Dimensional Engineered Tumor Model by Infrared Spectroscopic Imaging. Anal Chem. 2023 Feb 14;95(6):3349-3357. doi: 10.1021/acs.analchem.2c04554. Epub 2022 Dec 27. PMID: 36574385.
  • Pei ZF, Zhu L, Nair SK. Core-dependent post-translational modifications guide the biosynthesis of a new class of hypermodified peptides. Nat Commun. 2023 Nov 25;14(1):7734. doi: 10.1038/s41467-023-43604-5. PMID: 38007494; PMCID: PMC10676384.