All work performed by the Tumor Engineering and Phenotyping Shared Resource (TEP)  should be acknowledged in scholarly publications, posters, and presentations. Proper recognition allows us to measure the impact of our work and supports our initiatives in obtaining sponsored funding. In addition, any TEP personnel who makes a substantial intellectual or experimental contribution is deserving of further recognition as a co-author. Recent publications are listed where TEP has authorship or TEP contribution is recognized.

NanoString：

• Kolliopoulos V, Polanek M, Xu H, Harley B. Inflammatory Licensed hMSCs Exhibit Enhanced Immunomodulatory Capacity in a Biomaterial Mediated Manner. ACS Biomater Sci Eng. 2023 Aug 14;9(8):4916-4928. doi: 10.1021/acsbiomaterials.3c00290. Epub 2023 Jun 30. PMID: 37390452.
• Adam T. Nelczyk, Liqian Ma, Anasuya Das Gupta, Hashni Epa Vidana Gamage, Michael T. McHenry, Madeline A. Henn, Mohammed Kadiri, Yu Wang, Natalia Krawczynska, Shruti Bendre, Sisi He, Sayyed Hamed Shahoei, Zeynep Madak-Erdogan, Shih-Hsuan Hsiao, Tareq Saleh, Valerie Carpenter, David A. Gewirtz, Michael J. Spinella, Erik R. Nelson, The nuclear receptor TLX (NR2E1) inhibits growth and progression of triple- negative breast cancer, Biochimica et Biophysica Acta (BBA) – Molecular Basis of Disease, Volume 1868, Issue 11, 2022, 166515, ISSN 0925-4439, https://doi.org/10.1016/j.bbadis.2022.166515.
• Kolliopoulos V, Dewey MJ, Polanek M, Xu H, Harley BAC. Amnion and chorion matrix maintain hMSC osteogenic response and enhance immunomodulatory and angiogenic potential in a mineralized collagen scaffold. Front Bioeng Biotechnol. 2022 Nov 14;10:1034701. doi: 10.3389/fbioe.2022.1034701. PMID: 36466348; PMCID: PMC9714677.
• Hashni Epa Vidana Gamage, Sayyed Hamed Shahoei, Samuel T. Albright, Yu Wang, Amanda J. Smith, Rachel Farmer, Emma C. Fink, Elise Jacquin, Erin Weisser, Rafael O. Bautista, Madeline A. Henn, Claire P. Schane, Adam T. Nelczyk, Liqian Ma, Anasuya Das Gupta, ShrutiV. Bendre, Tiffany Nguyen, Srishti Tiwari, Natalia Krawczynska, Sisi He, Evelyn Tjoanda, Hong Chen, Maria Sverdlov, Peter H. Gann, Romain Boidot, Frederique Vegran, Sean W. Fanning, Lionel Apetoh, Paul J. Hergenrother, Erik R. Nelson
  bioRxiv 2023.08.14.553229; doi: https://doi.org/10.1101/2023.08.14.553229
• Stinson JA, P Barbosa MM, Sheen A, Momin N, Fink E, Hampel J, Selting KA, Kamerer RL, Bailey KL, Wittrup KD, Fan TM. Tumor-localized interleukin-2 and interleukin-12 combine with radiation therapy to safely potentiate regression of advanced malignant melanoma in pet dogs. Clin Cancer Res. 2024 Jul 9. doi: 10.1158/1078-0432.CCR-24-0861. Epub ahead of print. PMID: 38980919.

Seahorse Analyzer:

• Modi N, Chen Y, Dong X, Hu X, Lau GW, Wilson KT, Peek Jr. RM, Chen LF, BRD4 regulates glycolysis-dependent Nos2 expression in macrophages upon H. pylori infection, Cellular and Molecular Gastroenterology and Hepatology (2023), doi: https://doi.org/10.1016/ j.jcmgh.2023.10.001.
• Tian, Ye1; Jellinek, Matthew J.2; Mehta, Kritika3; Seok, Sun Mi4; Kuo, Shanny H.5; Lu, Wei1; Shi, Ruicheng1; Lee, Richard6; Lau, Gee W.5; Kemper, Jongsook Kim4,7; Zhang, Kai3; Ford, David A.2; Wang, Bo1,7,8. Membrane phospholipid remodeling modulates nonalcoholic steatohepatitis progression by regulating mitochondrial homeostasis. Hepatology ():10.1097/HEP.0000000000000375, April 1, 2023. | DOI: 10.1097/HEP.0000000000000375
• Victoria Messerschmidt, Wen Ren, Michael Tsipursky, Joseph Irudayaraj; Characterization of Oxygen Nanobubbles and In Vitro Evaluation of Retinal Cells in Hypoxia. Trans. Vis. Sci. Tech. 2023;12(2):16. https://doi.org/10.1167/tvst.12.2.16.
• Das Gupta A, Park J, Sorrells JE, Kim H, Krawczynska N, Gamage HEV, Nelczyk AT, Boppart SA, Boppart MD, Nelson ER. Cholesterol Metabolite 27-Hydroxycholesterol Enhances the Secretion of Cancer Promoting Extracellular Vesicles by a Mitochondrial ROS-Induced Impairment of Lysosomal Function. bioRxiv [Preprint]. 2024 May 1:2024.05.01.591500. doi: 10.1101/2024.05.01.591500. PMID: 38746134; PMCID: PMC11092642.

 

miRNA extraction and RT-PCR quantification：

• Wang X, Shepherd S, Li N, Che C, Song T, Xiong Y, Palm IR, Zhao B, Kohli M, Demirci U, Lu Y, Cunningham BT. A Target Recycling Amplification Process for the Digital Detection of Exosomal MicroRNAs through Photonic Resonator Absorption Microscopy. Angew Chem Int Ed Engl. 2023 Apr 11;62(16):e202217932. doi: 10.1002/anie.202217932. Epub 2023 Mar 6. PMID: 36622783; PMCID: PMC10073263.

 

Customized service:

• Hsieh PH, Phal Y, Prasanth KV, Bhargava R. Cell Phase Identification in a Three-Dimensional Engineered Tumor Model by Infrared Spectroscopic Imaging. Anal Chem. 2023 Feb 14;95(6):3349-3357. doi: 10.1021/acs.analchem.2c04554. Epub 2022 Dec 27. PMID: 36574385.
• Pei ZF, Zhu L, Nair SK. Core-dependent post-translational modifications guide the biosynthesis of a new class of hypermodified peptides. Nat Commun. 2023 Nov 25;14(1):7734. doi: 10.1038/s41467-023-43604-5. PMID: 38007494; PMCID: PMC10676384.